cwt_scalogram.m: MATLAB script for generating magnitude scalogram

MATLAB function

Description

Perform continuous wavelet transform (CWT) on population rate data from multiple simulations and save scalograms.

Input

param desired_dataset:

Name of the dataset folder (e.g., ‘23Jan2026’).

type desired_dataset:

string

Details

This function reads CSV files containing smoothed population rates for different nuclei and channels, averages across channels, computes the CWT using the bump wavelet, and saves two figures per simulation and nucleus: a time‑series plot with the CWT scalogram, and a standalone scalogram using MATLAB’s built‑in cwt plot.

Data organization (assumed): - The dataset folder must contain a subfolder data_recorded/ with simulation folders named model_9_simX_… - Inside each simulation folder, files named smoothed_pop_rate_<nucleus>_<channel>.csv with columns t_ms and smoothed_pop_rate.

Output

• Figures are saved in <desired_dataset>/figures/ as PNG files.

Usage

Source Code